1.2.1

Added

• Allow option to perform automatic alignment with Freesurfer's BBR for volumes without distortion correction (5d7d6ca)
• Add line_lanczos to available mappers (7721253)
• Use Freesurfer's BBR by default for automatic alignment (#384)

Fixed

• Parameter names for freesurfer.import_flat (4371b26))
• Fix left/right location of hemispheres for medial-pivot view (c3b029e)
• Animation functions in webgl.view (#372)
• Various fixes to 2D volumes
• Installation with numpy < 1.2 (#385)
• String encoding in openctm.pyx (6dc80db)

1.2.0

Added

• More functionality to import fMRIprep-processed data (#315)
• Function to rotate flatmaps (f88a)
• Option to ignore NaNs when averaging across the thickness of cortex (#355)
• New views for cortex.export.plot_panels and passing of additional kwargs (#361, #362)
• Specify colorbar location with default positionings for quickflat (#364)
• Pass custom colors for VolumeRGB (#366)

Fixed

• Bug with automatic creation of SVGs with ROIs (#340)
• Python 2/3 compatibilities for svgoverlay (#352)
• from_freesurfer/to_freesurfer handling of NIFTI images (#354)
• ROI label display parameters (#356)
• Improve documentation for install and demo (#359)
• Inkscape compatibility with newer versions (#365)
• Use correct contrast for automatic alignment with FreeSurfer's bbregister (39d8)

1.1.1

Fixed

• Installation fix for PyPi

1.1.0

Added

• Added function cortex.utils.download_subject to download new subjects for pycortex from web URLs. This function allows users to download FreeSurfer's fsaverage surface, with a flatmap and ROI labels made by Mark Lescroart (#344)
• Vertex objects have a new method .map() that allows mapping from one surface to another (#334)
• Add cortex.freesurfer.get_mri_surf2surf_matrix to create a sparse matrix implementing the mri_surf2surf command (#334 )
• Add function to plot and save 3D views and plot panels (#337 )
• Axis object can be passed to quickshow (#325)
• Help menu for the 3D WebGL viewer can be accessed with a shortcut (#319, #321)
• New keyboard shortcuts (list)
• Convenience function to import data preprocessed with fmriprep (#301 )
• Added option to use FreeSurfer's BBR for automatic alignment and function to use Freeview for manual alignment

Fixed

• Fix DataView2D to allow plotting of 2D datasets with quickflat
• Fix VertexRGB and VolumeRGB when alpha is not set
• Allow arbitrary positioning of the colorbar with quickflat
• Make quickflat more robust to extraneous polygons (#333)
• Fix mouse behavior when unfold > 0.5 in WebGL viewer (#330 )
• Sub surfaces fixes (#307)
• Firefox compatibility fixes (#306 )
• Miscellaneous python 3 fixes

1.0

1.0