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Bedqc: improving bedqc filter #48

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xuebingjie1990 opened this issue Jan 27, 2023 · 0 comments

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xuebingjie1990 commented Jan 27, 2023 •

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Currently, bedqc flags bed files that either

are larger than 2G,
have over 5 million regions, or
have mean region width less than 10 bp.

Brainstorming for more sophisticate filtering

xuebingjie1990 added the brainstorming label

khoroshevskyi transferred this issue from databio/bedbase

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