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TEM Simulator docs on Euler angle convention #97

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geoffwoollard opened this issue Apr 6, 2022 · 0 comments
Open

TEM Simulator docs on Euler angle convention #97

geoffwoollard opened this issue Apr 6, 2022 · 0 comments
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documentation Improvements or additions to documentation

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@geoffwoollard
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geoffwoollard commented Apr 6, 2022

Is there any docs in the TEM simulator on what convention is used? It would be really good to show how these angles are applied in the projection. Perhaps it could be illustrated in a notebook.

An idea:

  1. Read in angles from the tem simulator output data
  2. Make a rotation matrix, according to the right Euler angle convention: e.g. pytorch3d.transforms.euler_angles_to_matrix(..., convention='XZX')
  3. Use the linear simulator to rotate and project
  4. Show visually/numerically that the projections are identical. Numerically might be a bit tricky if the centring is off somehow in the TEM simulator. If so, visually could suffice.
@geoffwoollard geoffwoollard added the documentation Improvements or additions to documentation label Apr 6, 2022
@geoffwoollard geoffwoollard changed the title temsimulator docs on Euler angle convention TEM Simulator docs on Euler angle convention Apr 6, 2022
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