From 9c1fd5e470865c53313edbfa0199ce94a4b135d7 Mon Sep 17 00:00:00 2001 From: Giulio Caravagna Date: Thu, 31 Mar 2022 01:04:11 +0200 Subject: [PATCH] Update analyze_peaks.R --- R/analyze_peaks.R | 5 ++--- 1 file changed, 2 insertions(+), 3 deletions(-) diff --git a/R/analyze_peaks.R b/R/analyze_peaks.R index a0cf34d4..c9d51c30 100644 --- a/R/analyze_peaks.R +++ b/R/analyze_peaks.R @@ -49,8 +49,8 @@ #' @import BMix #' #' @examples -# data('example_dataset_CNAqc', package = 'CNAqc') -# x = init(example_dataset_CNAqc$snvs, example_dataset_CNAqc$cna,example_dataset_CNAqc$purity) +#' data('example_dataset_CNAqc', package = 'CNAqc') +#' x = init(example_dataset_CNAqc$snvs, example_dataset_CNAqc$cna,example_dataset_CNAqc$purity) #' #' x = analyze_peaks(x) #' print(x) @@ -59,7 +59,6 @@ #' #' x = analyze_peaks(x, matching_strategy = "rightmost") #' print(x) -#' analyze_peaks = function(x, karyotypes = c('1:0', '1:1', '2:0', '2:1', '2:2'), min_karyotype_size = 0,