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quant_bins error entry longer than 200000 nucleotides!!! #556

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Liao-PRIC opened this issue Sep 29, 2024 · 0 comments
Open

quant_bins error entry longer than 200000 nucleotides!!! #556

Liao-PRIC opened this issue Sep 29, 2024 · 0 comments

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@Liao-PRIC
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Hi all,

I just had an issue about metawrap quant_bins module as below:
Entry with header [S62_k141_95861] was longer than 200000 nucleotides.
Are you certain that we are indexing a transcriptome and not a genome?

The final results showed that a few bins were missing in the quantification result. It seems that the large contigs were removed due to the error above. Does any one know how to solve this issue? Is there a parameter to set the maximum length to be analyzed in metawrap quant_bins? Thank you!

Li

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