Error when running make

[seob1]

Hi,

I am trying to run the Hermes and did 'run'. However, I've got a error as below. I would appreciate if you provide me a solution.

Thanks!

$ make
Compiling hermes-1.cxx
In file included from hermes-1.cxx:22:0:
hermes-1.hxx:30:10: fatal error: bout/invert/laplace3d.hxx: No such file or directory
#include <bout/invert/laplace3d.hxx>
^~~~~~~~~~~~~~~~~~~~~~~~~~~
compilation terminated.
../../make.config:318: recipe for target 'hermes-1.o' failed
make: *** [hermes-1.o] Error 1

[bshanahan]

Hi there,

Yes, laplace3d has been removed from the main BOUT++ repo, so you can just comment this line out in the header file, then try again.

I don't think this option is necessary for hermes, but @bendudson should confirm.

[bendudson]

I will have to check, but last time I tried this version of Hermes only works with BOUT++ v3.1. That can be downloaded from here: https://github.com/boutproject/BOUT-dev/releases/tag/v3.1
There is a more up-to-date version of Hermes, which includes hot ions and compiles with the latest BOUT++, available here: https://github.com/bendudson/hermes-2

[seob1]

@bshanahan and @bendudson
Thanks you all so much!

[seob1]

@bshanahan
I commented the line and tried to do 'make' but I've got error (this is a part of the error the error is too long to paste here):

$ make
Compiling hermes-1.cxx
In file included from hermes-1.hxx:31:0,
from hermes-1.cxx:22:
../../include/bout/invert/laplacexy.hxx:39:2: warning: #warning LaplaceXY requires PETSc. No LaplaceXY available [-Wcpp]
#warning LaplaceXY requires PETSc. No LaplaceXY available
^~~~~~~
In file included from hermes-1.hxx:35:0,
from hermes-1.cxx:22:
radiation.hxx:22:29: error: ‘string’ does not name a type; did you mean ‘stdin’?
InterpRadiatedPower(const string &file);
^~~~~~
stdin
In file included from hermes-1.cxx:22:0:
hermes-1.hxx:302:3: warning: type qualifiers ignored on function return type [-Wignored-qualifiers]
const BoutReal bcast_lasty(const BoutReal f);
^~~~~
hermes-1.cxx: In function ‘const Field3D ceil(const Field3D&, BoutReal)’:
hermes-1.cxx:47:26: error: ‘class Mesh’ has no member named ‘ngx’
for (int jx=0;jxngx;jx++)
^~~
hermes-1.cxx:48:28: error: ‘class Mesh’ has no member named ‘ngy’
for (int jy=0;jyngy;jy++)
^~~
hermes-1.cxx:49:30: error: ‘class Mesh’ has no member named ‘ngz’
for (int jz=0;jzngz;jz++) {
^~~
hermes-1.cxx: In member function ‘virtual int Hermes::init(bool)’:
hermes-1.cxx:163:56: error: cannot convert ‘FieldGeneratorPtr {aka std::shared_ptr}’ to ‘FieldGenerator*’ in assignment
sol_ne = FieldFactory::get()->parse("sol_ne", optsc);
^

[bshanahan]

Hi, can you please post the output of `git branch -v', both in the BOUT++ directory, and in the hermes directory?

[bendudson]

I suspect these are some of the many things which have changed in BOUT++ since this version of Hermes was last used. It does compile with BOUT++ 3.1 (2017), but many things changed in BOUT++ between v3.1 and v4.x

[seob1]

Hi @bshanahan
Here is the output.

~/BOUT-dev/examples/hermes-master$ git branch -v
master 3541f7bc5 Merge pull request #1869 from boutproject/mpark-lock

• next 229253f15 Merge pull request #1738 from boutproject/better-cleaning

[bshanahan]

Hi,

Please see the comment from @bendudson. At the moment, hermes-1 is meant to compile with BOUT++ version 3.1. You are using a much more recent version of BOUT++. Either switch to hermes-2, the hot ion version, or check out BOUT++ v3.1, per @bendudson:

I will have to check, but last time I tried this version of Hermes only works with BOUT++ v3.1. That can be downloaded from here: https://github.com/boutproject/BOUT-dev/releases/tag/v3.1
There is a more up-to-date version of Hermes, which includes hot ions and compiles with the latest BOUT++, available here: https://github.com/bendudson/hermes-2