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How to read (data deepgo/'+ont+'. pk) files #51

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Da-tweekaz opened this issue May 4, 2023 · 3 comments
Open

How to read (data deepgo/'+ont+'. pk) files #51

Da-tweekaz opened this issue May 4, 2023 · 3 comments

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@Da-tweekaz
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Hello, I have a question about this code: terms_ df = pd.read_ Pickle ('data deepgo/'+ont+'. pkl '). This code is evaluated in the_ On line 43 of the evaluate_deepgo.py file, I would like to ask where this is read from (data deepgo/'+ont+'. pk) file. Could you please explain?

@coolmaksat
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Hi,
That script evaluates the predictions from the first version of DeepGO. The data for it can be found here https://deepgo.cbrc.kaust.edu.sa/data/deepgo/data.tar.gz , look at mf.pkl, bp.pkl, cc.pkl files

@Da-tweekaz
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你好, 该脚本评估了第一版 DeepGO 的预测。它的数据可以在这里找到https://deepgo.cbrc.kaust.edu.sa/data/deepgo/data.tar.gz,查看 mf.pkl、bp.pkl、cc.pkl 文件

Thank you very much for answering my question so quickly. I have another question: Where can I download the data of the paper results obtained from the evaluate_ *py series code? I saw that you mentioned before that the data will be constantly updated, and now I want to reproduce the results in paper. Can you tell me the corresponding data address for the paper results?

@coolmaksat
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Hi, the same file (data.tar.gz) should be the one reported in the paper. For the updates we also assign a version.

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