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art.cls
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art.cls
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%--------------------------------------------------------------------------
% Anoma Research Topics template
% By Jonathan Prieto-Cubides, TG × ⊙, Tobias Heindel, and
% GitHub contributors seen at https://github.com/anoma/art-template.
% Template based on pi-article.cls v4.0, extarticle, and CPU-msc template.
%--------------------------------------------------------------------------
\NeedsTeXFormat{LaTeX2e}
\ProvidesClass{art}[23/08/2024, v1.1]
\RequirePackage{etoolbox} % a necessity
% Class options and conditionals
%% Toggles for various conditions and options
\newtoggle{SI} % switching to SI format
\newtoggle{shortintro} % will not include abstract in the title page
\newtoggle{tocfig} % small figure next to the abstract
\newtoggle{twocolumn} % text will be laid out in two column
\newtoggle{toprule} % large line at the top
\toggletrue{toprule}
\newtoggle{linenumbers} % including line numbers
\newtoggle{affiltop} % author affiliation at the top
\toggletrue{affiltop}
\newtoggle{footdate} % add current date in footer
\toggletrue{footdate}
\newtoggle{footpreprint} % add a "Preprint" text in footer
\toggletrue{footpreprint}
\newtoggle{debug} % debugging activated
\newtoggle{history} % information about the revision history
\toggletrue{history}
\newtoggle{toc} % table of contents
\togglefalse{toc}
\newtoggle{conference} % conference mode
\togglefalse{conference}
\newtoggle{bibconfig} % no bibliography config
\toggletrue{bibconfig}
\newtoggle{bibstyle} % no bibliography style
\toggletrue{bibstyle}
\newtoggle{easyreview}
\newtoggle{anonymous} % anonymous submission
\togglefalse{anonymous}
\newtoggle{noauthors} % no authors
\togglefalse{noauthors}
\newtoggle{nodate} % no date
\togglefalse{nodate}
\newtoggle{draft} % draft mode
\togglefalse{draft}
% Option for type of article
\newcommand{\arttype}{ARTICLE}
\DeclareOption{techreport}{\renewcommand{\arttype}{TECHNICAL REPORT}}
\DeclareOption{commun}{\renewcommand{\arttype}{COMMUNICATION}}
\DeclareOption{review}{\renewcommand{\arttype}{REVIEW}}
\DeclareOption{persp}{\renewcommand{\arttype}{PERSPECTIVE}}
\DeclareOption{nohistory}{\togglefalse{history}}
\DeclareOption{toc}{\toggletrue{toc}}
\DeclareOption{draft}{\toggletrue{draft}}
\DeclareOption{noauthors}{\toggletrue{noauthors}}
\DeclareOption{nodate}{\toggletrue{nodate}}
\DeclareOption{conference}{%
\renewcommand{\arttype}{CONFERENCE ARTICLE}%
\toggletrue{conference}%
\togglefalse{history}%
}
\DeclareOption{letterpaper}{
\PassOptionsToClass{letterpaper}{geometry}
}
\DeclareOption{a4paper}{
\PassOptionsToClass{a4paper}{geometry}
}
% Option for switching to SI format
\DeclareOption{SI}{\toggletrue{SI}}
% Option for two column format
\DeclareOption{twocolumn}{
\toggletrue{twocolumn}
\PassOptionsToClass{twocolumn}{extarticle}
}
% Option for line numbers
\DeclareOption{lineno}{\toggletrue{linenumbers}}
% Option for footer
\DeclareOption{nofootdate}{\togglefalse{footdate}}
\DeclareOption{nofootprint}{\togglefalse{footpreprint}}
% Option for affiliation location
\DeclareOption{affiltop}{\toggletrue{affiltop}}
% Option for toc image
\DeclareOption{tocfig}{\toggletrue{tocfig}}
\DeclareOption{nobibconfig}{\togglefalse{bibconfig}}
\DeclareOption{nobibstyle}{\togglefalse{bibstyle}}
% Option for debugging format
\DeclareOption{debug}{\toggletrue{debug}}
\DeclareOption{easyreview}{\toggletrue{easyreview}}
\DeclareOption{anonymous}{%
\typeout{Using the anonymous option}
\toggletrue{anonymous}
\togglefalse{history}
\togglefalse{toc}
}
\DeclareOption*{\PassOptionsToClass{\CurrentOption}{extarticle}} % pass other options to base class
\ProcessOptions*\relax % finish options
\LoadClass[12pt]{extarticle}
\iftoggle{easyreview}{
\RequirePackage{easyReview}
}
% Global settings for SI format
\iftoggle{SI}{
\togglefalse{toprule} % no top rule
\toggletrue{shortintro} % no abstract
\toggletrue{twocolumn} % single column
\def\thepage{S\arabic{page}} % pages as S1-SX
\renewcommand*\thefigure{S\arabic{figure}} % Figures as Fig. S1
\renewcommand*\thetable{S\arabic{table}} % Tables as Table S1
\renewcommand*\theequation{S\arabic{equation}} % Equations as Eq. S1
\AtBeginDocument{% % Bibliographies as Ref. S1
\renewcommand*\citenumfont[1]{S#1}%
\renewcommand*\bibnumfmt[1]{(S#1)}%
}
}{}
% Fonts
%% Set up main page fonts
\iftoggle{conference}{%
\newcommand{\headerfont}{\color{gray}\bfseries\fontsize{14pt}{14pt}\selectfont}
\newcommand{\footerfont}{\normalfont\fontsize{10pt}{11pt}\selectfont}
\newcommand{\titlefont}{\bfseries\fontsize{20pt}{22pt}\selectfont}
\newcommand{\subtitlefont}{\bfseries\fontsize{15pt}{18pt}\selectfont}
\newcommand{\artypefont}{\bfseries\fontsize{7pt}{9pt}\selectfont}
\newcommand{\contactfont}{\itshape\fontsize{10pt}{11pt}\selectfont}
\newcommand{\absfont}{\normalfont\fontsize{10pt}{11pt}\selectfont}
\newcommand{\keywordsfont}{\normalfont\fontsize{10pt}{11pt}\selectfont}
\newcommand{\footnotefont}{\normalfont\fontsize{10pt}{11pt}\selectfont}
\newcommand{\monofontscale}{0.94}
}{%
\iftoggle{anonymous}{%
\newcommand{\headerfont}{\color{gray}\bfseries\fontsize{12.6pt}{12.6pt}\selectfont}
\newcommand{\footerfont}{\normalfont\fontsize{9pt}{9.9pt}\selectfont}
\newcommand{\titlefont}{\bfseries\fontsize{18pt}{19.8pt}\selectfont}
\newcommand{\subtitlefont}{\bfseries\fontsize{13.5pt}{16.2pt}\selectfont}
\newcommand{\artypefont}{\bfseries\fontsize{6.3pt}{8.1pt}\selectfont}
\newcommand{\contactfont}{\itshape\fontsize{9pt}{9.9pt}\selectfont}
\newcommand{\absfont}{\normalfont\fontsize{9pt}{9.9pt}\selectfont}
\newcommand{\keywordsfont}{\normalfont\fontsize{9pt}{9.9pt}\selectfont}
\newcommand{\footnotefont}{\normalfont\fontsize{9pt}{9.9pt}\selectfont}
\newcommand{\monofontscale}{0.846} % 0.94 * 0.9 = 0.846
}{
\newcommand{\headerfont}{\color{gray}\bfseries\fontsize{16pt}{20pt}\selectfont}
\newcommand{\footerfont}{\normalfont\fontsize{7pt}{9pt}\selectfont}
\newcommand{\titlefont}{\bfseries\fontsize{22pt}{24pt}\selectfont}
\newcommand{\subtitlefont}{\bfseries\fontsize{15pt}{20pt}\selectfont}
\newcommand{\artypefont}{\bfseries\fontsize{7pt}{9pt}\selectfont}
\newcommand{\contactfont}{\itshape\fontsize{7pt}{9pt}\selectfont}
\newcommand{\absfont}{\normalfont\fontsize{10pt}{11pt}\selectfont}
\newcommand{\keywordsfont}{\normalfont\fontsize{8pt}{11pt}\selectfont}
\newcommand{\footnotefont}{\normalfont\fontsize{7pt}{9pt}\selectfont}
\newcommand{\monofontscale}{0.94}
}
}
\RequirePackage{iftex}
\ifPDFTeX
\RequirePackage[LGR,TS1,T1]{fontenc}
\RequirePackage[utf8]{inputenc}
\RequirePackage{cmap}
\RequirePackage{textcomp}
\else
% \usepackage[euler]{fontsetup}
% \usepackage[concrete]{fontsetup}
% \usepackage[libertinus]{fontsetup}
% \usepackage[kerkis]{fontsetup}
% \usepackage[gfsdidot]{fontsetup}
% \usepackage{sansmathfonts}
% \renewcommand*\familydefault{\sfdefault}
% \defaultfontfeatures{Ligatures=TeX,Scale=MatchLowercase}
% \defaultfontfeatures{Scale=MatchLowercase}
% \defaultfontfeatures[\rmfamily]{Ligatures=TeX,Scale=1}
\fi
\RequirePackage[libertine,amsthm]{newtx}
\RequirePackage[varqu,scaled=\monofontscale]{zi4} % inconsolata
\ifPDFTeX
%\RequirePackage[scaled=.78]{beramono}
%\RequirePackage[scaled=.83]{cascadia-code}
%\RequirePackage[scaled=.825]{GoMono}
\else
\setmonofont[Scale=MatchLowercase]{inconsolata}
\fi
\RequirePackage{mathrsfs}
% Language
\ifPDFTeX
\RequirePackage[english]{babel}
\else
\usepackage{polyglossia}
\setmainlanguage[]{english}
\fi
% Microtype
\AtEndOfClass{\RequirePackage{microtype}}
% Use \say command for quotation
\RequirePackage{dirtytalk}
% for double-brackets
\RequirePackage{stmaryrd}
\allowdisplaybreaks
% Additional maths packages
\RequirePackage{
textcomp,
mathtools,
xparse,
thmtools,
thm-restate
}
% QED symbol for proofs
% Recall to use \qedhere where the proof ends.
\renewcommand{\qedsymbol}{{ \(\square\)}}
\declaretheoremstyle[
headfont=\normalfont\bfseries,
bodyfont=\normalfont\itshape,
headpunct={.},
]{p-thm}
\declaretheoremstyle[
headfont=\normalfont\bfseries,
bodyfont=\normalfont,
headpunct={.},
spacebelow=\topsep,
spaceabove=\topsep,
]{p-example}
\declaretheorem[style=p-thm]{theorem}
\declaretheorem[sibling=theorem,style=p-thm]{lemma}
\declaretheorem[sibling=theorem,style=p-thm]{proposition}
\declaretheorem[sibling=theorem,style=p-thm]{corollary}
\declaretheorem[sibling=theorem,style=p-thm]{conjecture}
\declaretheorem[sibling=theorem,style=p-thm]{statement}
\declaretheorem[sibling=theorem,style=p-thm]{axiom}
\declaretheorem[sibling=theorem,style=p-thm]{construction}
\declaretheorem[sibling=theorem,style=p-thm]{definition}
\declaretheorem[sibling=theorem,style=p-example]{remark}
\declaretheorem[sibling=theorem,style=p-thm]{notation}
\declaretheorem[sibling=theorem,style=p-example]{example}
%% Add bolding to math where needed
\g@addto@macro\bfseries{\boldmath}
% Natural deduction proofs
\RequirePackage{bussproofs}
\RequirePackage{proof}
% General pagination setup and tools
\RequirePackage[
%letterpaper,
includeheadfoot, % paper size, head/foot included in geometry
top=3cm,bottom=3cm, % top/bottom
left=4cm,right=4cm, % left/right
marginparwidth=2cm, % margins (used for line numbers)
marginparsep=5pt, % margin separation
headheight=20pt, % header height
headsep=20pt, % text distance from header
footskip=25pt
]{geometry}
\iftoggle{anonymous}{
\geometry{
top=2.5cm,
bottom=2.3cm,
left=3cm,
right=3cm,
headsep=0pt,
headheight=0pt,
footskip=19pt,
marginparwidth=1.5cm,
}
}{}
\iftoggle{twocolumn}{ % smaller margins if two-column
\geometry{
top=25pt,bottom=35pt, % top/bottom
left=55pt,right=55pt, % left/right
headsep=10pt
}
}{}
\iftoggle{debug}{
\geometry{
showframe,showcrop, % for debugging
}
}{}
\setlength{\columnsep}{13.5pt} % Distance between the two columns of text
\setlength{\parindent}{12pt} % Paragraph indent
\RequirePackage{changepage} % change odd/even page at any point
\RequirePackage{lastpage} % Refer to last page of the document
\RequirePackage{afterpage} % execute a command on next page (useful for \clearpage flush)
\RequirePackage{enumitem} % For reducing bullet list item separation
% Figures, tables, equations and listings
% Figures
\RequirePackage{graphicx} % include pictures
\RequirePackage{tikz} % drawing pictures
\RequirePackage{quiver} % drawing quiver diagrams
\usetikzlibrary{%
svg.path, % TIKZ svg paths
calc, % TIKZ calculations
graphs, % TIKZ graphs
trees, % TIKZ trees
shapes.geometric, % TIKZ geometric shapes
arrows, % TIKZ arrows
positioning, % TIKZ positioning
backgrounds, % TIKZ backgrounds
fit, % TIKZ fitting
}
\RequirePackage[framemethod=tikz]{mdframed} % breakable framed and coloured boxes
\iftoggle{conference}{%
\tikzset{
every picture/.append style={transform shape, scale=0.8}
}
}{}
%% Set document color scheme
\RequirePackage{xcolor} % driver indepentent color extensions
\definecolor{black50}{gray}{0.5} % 50% black for hrules
\definecolor{color0}{RGB}{0,0,0} % Base
\definecolor{color1}{RGB}{59,90,198} % author email, doi
\definecolor{anoma}{HTML}{AE3133} % Anoma red
\definecolor{absshadecolor}{cmyk}{0,0,0,.12}
% \usepackage{parskip}
\usepackage{stackengine}
\usepackage[most]{tcolorbox}
% Tables
\RequirePackage{
threeparttable, % clean separators (with '\toprule', '\midrule', '\bottomrule')
booktabs, % overall nice table quality
array, % better column and row definitions
longtable, % for tables spanning multiple pages
makecell, % multilined table cells
tabularx, % width-expanding column (with 'x')
multirow, % for multirow cells (with \\)
colortbl, % to add colours to table cells,
%xypic, % for commutative diagrams
footnote % support for footnotes inside tabular
% colortblarray,
% array, % for better column definitions
}
% Support footnotes inside tabular. No use table
% instead, use \captionof{table}{..}
\makesavenoteenv{tabular}
\makesavenoteenv{tabularx}
\makesavenoteenv{table}
\RequirePackage{setspace} % to set different spacing in paragraphs
% booktabs provide nice spacing, but rule widths and distances need modifying
\setlength{\heavyrulewidth}{0.5pt} % wide rule
\setlength{\lightrulewidth}{0.5pt} % light rule
\setlength{\aboverulesep}{1.5pt} % blank space above rules
\setlength{\belowrulesep}{1.5pt} % blank space below rules
\setlength{\belowbottomsep}{5pt} % blank space below whole table
\newlength\q
\setlength\q{\dimexpr .45\textwidth -2\tabcolsep} % all width of tabularx columns
\newcolumntype{P}[1]{>{\centering\arraybackslash}p{#1}}
\AtBeginEnvironment{tabular}{% % font inside tables will be small
\fontsize{9}{11}\selectfont
}
%% command we can use to add some text e.g. below the table
\newcommand{\addtabletext}[1]{{\setlength{\leftskip}{9pt}\fontsize{7}{9}\selectfont#1}}
% Equations
% placed in square brackets
%\renewcommand\tagform@[1]{\maketag@@@ {[\ignorespaces #1\unskip \@@italiccorr ]}}
% For numbering just one line of an equation
\newcommand\numberthis{\addtocounter{equation}{1}\tag{\theequation}}
% Floats, subfloats and their captions
\RequirePackage{float} % improved interface for floating objects
\RequirePackage{dblfloatfix} % fixes for twocolumn floats
\RequirePackage{placeins} % for the floatbarrier macro
% distance between floats and text
\setlength{\textfloatsep}{6pt \@plus 2.0pt \@minus 2.0pt}
% distance between two floats
\setlength{\floatsep}{8pt \@plus 2.0pt \@minus 2.0pt}
% Better captions
\RequirePackage[
skip=3pt, % vertical space between caption and figure
labelfont={bf,sf}, % we bold the caption label
labelsep=period, % periods after label (Fig. 1:)
% figurename=Fig. % figure will be abbreviated
% tablename=Tbl. % table will be abbreviated
]{caption}
% overall font types (excluding label)
\iftoggle{conference}{%
\DeclareCaptionFormat{fmt}{\normalfont\fontsize{10pt}{12pt}\selectfont#1#2#3}
}{
\DeclareCaptionFormat{fmt}{\normalfont\fontsize{10pt}{12pt}\selectfont#1#2#3}
}
\captionsetup*{format=fmt} % for figures
\captionsetup*[table]{format=fmt,position=above} % for tables
% Subfigures
\RequirePackage{subcaption}
% Sidecaptions
\RequirePackage[rightcaption]{sidecap}
% Utilities
% Filler text
\RequirePackage{lipsum}
% Todo notes
\iftoggle{draft}{
\RequirePackage[
color=lightgray!10,
linecolor=lightgray,
]{todonotes}
}{
\RequirePackage[
disable,
]{todonotes}
}
% Science-related packages
% In-line fractions
\RequirePackage{xfrac}
% The SIunitx package enables the \SI{}{} command.
\RequirePackage{siunitx}
\sisetup{
detect-weight=true,
detect-family=true,
per-mode=reciprocal,
range-units=single, % brief SIrange
range-phrase=-- % and using lines
}
% The mchem package for formula subscripts using \ce{}
\RequirePackage[version=4]{mhchem}
% Bibliography, footnotes and their settings
\iftoggle{bibconfig}{
% Natbib package for text references
\RequirePackage[
numbers, % numbers as references
merge, % merge multiple references in one
%super, % superscript
%sort&compress,
%round, % parentheses around year
%semicolon, % separate references with semicolon
%nonamebreak, % keep authors on the same line
]{natbib}
\iftoggle{bibstyle}{
%\bibliographystyle{unsrtnat}
\bibliographystyle{alphaurl}
%\bibliographystyle{apalike}
%\bibliographystyle{ACM-Reference-Format}
}{}
% Moves references after punctuation
\RequirePackage{natmove}
\renewcommand*{\natmovechars}{.} % only after full stop
% Bibliography style
%% No separation between references
\setlength{\bibsep}{0.0pt}
%% set Bibliography font
\renewcommand\bibfont{\normalfont\fontsize{10}{11}\selectfont}
%% Use "References" as bibliography title
\renewcommand{\bibname}{References}
\renewcommand{\refname}{References}
\AtEndOfClass{
\renewcommand{\tocbibname}{References}
}
%% Remove brackets from label
\renewcommand\@biblabel[1]{ #1.}
}{} % bibconfig
% Footnotes
\RequirePackage[%
flushmargin % This option makes footnotes align with the margin.
, ragged % This option sets the footnote text to be left-aligned.
% , symbol* % This option changes the symbols used for
% footnotes. Instead of numbers, symbols like *, †, ‡, etc., will be used
]{footmisc}
\renewcommand*{\footnotelayout}{\footnotefont}
\renewcommand{\footnoterule}{% Set the footnote hrule style
\kern -3pt
{\color{black50} \hrule width 72pt height 0.25pt}
\kern 2.5pt
}
\RequirePackage{hyphenat} % break long verbatim text
% References and bookmarks
% Xr:
% To reference another document, in this case the SI
\RequirePackage{xr, xr-hyper}
% Hyperlinking
\RequirePackage[
colorlinks=true,
allcolors=anoma,
pagebackref=true,
]{hyperref}
\PassOptionsToPackage{unicode}{hyperref}
\PassOptionsToPackage{naturalnames}{hyperref}
\RequirePackage{hypernat}
\RequirePackage{backref}
% Backref settings
\renewcommand*{\backref}[1]{}
\renewcommand*{\backrefalt}[4]{{%
\ifcase #1 %
\or (cit. on p.~#2.)%
\else (cit. on pp. #2.)%
\fi%
}}
% https://tex.stackexchange.com/questions/183702/formatting-back-references-in-bibliography-bibtex
%% Set URL link color & font
\renewcommand\UrlFont{\color{anoma}}
% References
\RequirePackage[
capitalise,
nameinlink,
]{cleveref}
\pdfstringdefDisableCommands{%
\def\\{}%
\def\texttt#1{<#1>}%
}
% Equation reference label has no brackets
\creflabelformat{equation}{#2\textup{#1}#3}
\RequirePackage{doi} % DOIs
\RequirePackage[nottoc]{tocbibind} % References section in TOC (for SI)
% Nice typesetting of codeblocks
\definecolor{light-gray}{gray}{0.95}
\lstset{columns=fullflexible,%
basicstyle=\ttfamily\footnotesize,%
backgroundcolor=\color{light-gray},%
xleftmargin=0.5cm,%
frame=tlbr,%
framesep=4pt,%
framerule=0pt%
}
\@ifpackageloaded{minted}{
\usemintedstyle{trac}
\newminted[betterpython]{python}{%
linenos=false,%
breaklines,%
autogobble,%
frame=leftline,%
framerule=0.5pt,%
framesep=2em,
tabsize=2
}}{}
%
% Other Setup
% Author and affiliation
% Keeps footnotes where they should be
\RequirePackage{titling}
\setlength\thanksmarkwidth{0em}
\setlength\thanksmargin{-\thanksmarkwidth}
% Typesetting for authors/affiliations
\RequirePackage{authblk}
\setlength{\affilsep}{8.5pt} % 16.5pts between base of author line and base of affil line
\renewcommand\Authfont{\color{color0}\normalfont\bfseries\fontsize{9}{11}\selectfont}
\renewcommand\Affilfont{\color{color0}\footnotefont}
\renewcommand\AB@affilsepx{\newline\protect\Affilfont}
\renewcommand\Authands{, and }
% Author and paper metadata
%% ORCID logo
\definecolor{orcidlogocol}{HTML}{A6CE39}
\tikzset{
orcidlogo/.pic={
\fill[orcidlogocol] svg{M256,128c0,70.7-57.3,128-128,128C57.3,256,0,198.7,0,128C0,57.3,57.3,0,128,0C198.7,0,256,57.3,256,128z};
\fill[white] svg{M86.3,186.2H70.9V79.1h15.4v48.4V186.2z}
svg{M108.9,79.1h41.6c39.6,0,57,28.3,57,53.6c0,27.5-21.5,53.6-56.8,53.6h-41.8V79.1z M124.3,172.4h24.5c34.9,0,42.9-26.5,42.9-39.7c0-21.5-13.7-39.7-43.7-39.7h-23.7V172.4z}
svg{M88.7,56.8c0,5.5-4.5,10.1-10.1,10.1c-5.6,0-10.1-4.6-10.1-10.1c0-5.6,4.5-10.1,10.1-10.1C84.2,46.7,88.7,51.3,88.7,56.8z};
}
x}
%% Article meta data additional fields
\newcommand{\pubdoi}[1]{\iftoggle{anonymous}{}{\def\@pubdoi{#1}}}
\newcommand{\pubdate}[1]{\iftoggle{anonymous}{}{\def\@pubdate{#1}}}
\iftoggle{history}{%
\newcommand{\history}[1]{\def\@history{#1}}%
}{%
\newcommand{\history}[1]{}%
}
\newcommand{\keywords}[1]{\def\@keywords{#1}} % keywords
\newcommand{\sep}[0]{; } % keyword separator
\newcommand{\contact}[1]{\def\@contact{#1}} % contact author
\newcommand{\leadauthor}[1]{\def\@leadauthor{#1}} % lead (first) author
\newcommand{\equalcontrib}[1]{\def\@equalcontrib{#1}} % equal contribution switch
\newcommand{\orcid}[1]{ % ORCID
\href{https://orcid.org/#1}{\mbox{
\begin{tikzpicture}[overlay,remember picture]
\coordinate (A);
\coordinate (B) at ($(A)-(6pt,-8pt)$);
\end{tikzpicture}
\begin{tikzpicture}[overlay,remember picture,yscale=-0.04,xscale=0.04,transform shape]
\pic at (B) {orcidlogo};
\end{tikzpicture}
}{}}}
% Headers and footers
%% Fancyhdr styling
\RequirePackage{fancyhdr} % custom headers/footers
\fancyhf{}
\iftoggle{anonymous}{%
}{%
\pagestyle{fancy} % Set all pagestyle to fancy
% Clear everything
% Headers
\renewcommand{\headrulewidth}{0pt} % No header rule normally
\renewcommand{\footrulewidth}{0pt} % No footer rule normally
% Footers
\fancyfoot[R]{% % footer right side
\iftoggle{SI}{
\footerfont\textit{Supplementary Information}\hspace{7pt}|% % we add SI as text
}{
\iftoggle{footpreprint}{
\footerfont\href{http://art.anoma.net}{Anoma Research Topics}\hspace{7pt}|% % we add preprint text
}{}
}
\iftoggle{footdate}{
\hspace{7pt}\textbf{\@ifundefined{@pubdate}{\today}{\@pubdate}}\hspace{7pt}|% % add date
}{}
\hspace{7pt}\textbf{\thepage}} % add page number
\fancyfoot[L]{% % footer left side
\footerfont\@ifundefined{@pubdoi}{}{%
\href{https://dx.doi.org/\@pubdoi}{DOI: \@pubdoi}} % add DOI + hyperlink
% \footerfont\@ifundefined{@leadauthor}{}{\@leadauthor}% % lead author name
% \ifnum \value{authors} > 1\textit{ et al.}\fi% % and et.al.
}
% Modifying the plain style (applied automatically with title page)
\fancypagestyle{plain}{%
\fancyhf{} % clear everything
\iftoggle{toprule}{% % if SI, we add a top rule
\fancyhead[L]{%
$\vcenter{\hbox{{%
\includegraphics[height=20pt]{anoma-logo.pdf}%
}}}%
\vcenter{%
{\Large
\href{https://art.anoma.net}{Anoma Research Topics}} | \textsf{\arttype{}}
}$
% \hrule
} % article type
% \\ % Add article type and rule
% \colorbox{black}{\parbox{18em}{\centering\color{white}\subtitlefont{\arttype}}}}
}{}
\fancyfoot[R]{ % footer right side
\iftoggle{SI}{
\footerfont\textit{Supplementary Information}\hspace{7pt}|% % we add SI as text
}{
\iftoggle{footpreprint}{
\footerfont\textit{Anoma Research Topics}\hspace{7pt}|% % we add preprint text
}{}
}
\iftoggle{footdate}{
\hspace{7pt}\textbf{\@ifundefined{@pubdate}{\today}{\@pubdate}}\hspace{7pt}|% % add date
}{}
\hspace{7pt}\textbf{\thepage\textendash\pageref{LastPage}}} % add page number
\fancyfoot[L]{\footerfont\@ifundefined{@pubdoi}{}{% % footer left side
\href{https://dx.doi.org/\@pubdoi}{DOI: \@pubdoi}}} % add DOI + hyperlink
}
}
% Line numbers
% Check switch for line numbers
\iftoggle{linenumbers}{
% use lineno in switch mode if doublecolumn
\iftoggle{twocolumn}{
\RequirePackage[switch]{lineno}
}{
\RequirePackage{lineno}
}
\renewcommand\linenumberfont{\normalfont\tiny}
\linenumbers
}{}
% Typesetting
%% Section/subsection/paragraph set-up
\RequirePackage[explicit]{titlesec}
\setcounter{secnumdepth}{5}
\titleformat{\section}
{\large\bfseries}
{\thesection.}
{0.5em}
{#1}
[]
\titleformat{name=\section,numberless}
{\large\bfseries}
{}
{0em}
{#1}
[]
\iftoggle{twocolumn}{
\titleformat{\subsection}[runin]
{\bfseries}
{\thesubsection.}
{0.5em}
{#1. }
[]
}{
\titleformat{\subsection}
{\bfseries}
{\thesubsection.}
{0.5em}
{#1}
[]
}
\iftoggle{twocolumn}{
\titleformat{\subsubsection}[runin]
{\bfseries}
{\thesubsubsection.}
{0.5em}
{#1. }
[]
}{
\titleformat{\subsubsection}
{\bfseries}
{\thesubsubsection.}
{0.5em}
{#1}
[]
}
\titleformat{\paragraph}[runin]
{\small\bfseries}
{}
{0em}
{#1. }
\iftoggle{twocolumn}{
\titlespacing*{\section}{0pc}{3ex \@plus4pt \@minus3pt}{5pt}
\titlespacing*{\subsection}{0pc}{2.5ex \@plus3pt \@minus2pt}{12pt}
\titlespacing*{\subsubsection}{0pc}{2ex \@plus2.5pt \@minus1.5pt}{12pt}
\titlespacing*{\paragraph}{0pc}{1.5ex \@plus2pt \@minus1pt}{12pt}
}{
\titlespacing*{\section}{0pc}{3ex \@plus4pt \@minus3pt}{5pt}
\titlespacing*{\subsection}{0pc}{2.5ex \@plus3pt \@minus2pt}{2pt}
\titlespacing*{\subsubsection}{0pc}{2ex \@plus2.5pt \@minus1.5pt}{2pt}
\titlespacing*{\paragraph}{0pc}{1.5ex \@plus2pt \@minus1pt}{12pt}
}
%% Abstract formatting
\def\xabstract{abstract}
\long\def\abstract#1\end#2{
\def\two{#2}
\ifx\two\xabstract
\long\gdef\theabstract{\ignorespaces#1}
\def\go{\end{abstract}}
\else
\typeout{^^J^^J PLEASE DO NOT USE ANY \string\begin\space \string\end^^J COMMANDS WITHIN ABSTRACT^^J^^J}#1\end{#2}
\gdef\theabstract{%
\vskip12pt BADLY FORMED ABSTRACT: PLEASE DO NOT USE {\tt\string\begin...\string\end} COMMANDS WITHIN THE ABSTRACT\vskip12pt%
}\let\go\relax
\fi
\go}
% \RequirePackage{framed}
% Define an environment with abstract content and styling
\newcommand{\abscontent}{
\noindent%
{%
\vskip3pt%
\iftoggle{tocfig}{
\begin{minipage}{0.56\linewidth}
\absfont \theabstract
\end{minipage}
\begin{minipage}{0.4\linewidth}
\raggedleft
\IfFileExists{figs/tocfig.png}{% no good way of checking for extension
\includegraphics[width=0.9\linewidth]{figs/tocfig}}
{\IfFileExists{figs/tocfig.bmp}{
\includegraphics[width=0.9\linewidth]{figs/tocfig}}
{\IfFileExists{figs/tocfig.pdf}{
\includegraphics[width=0.9\linewidth]{figs/tocfig}}
}{\includegraphics[width=0.9\linewidth]{example-image}}}
\end{minipage}%
}{
\begin{minipage}{\linewidth}
\absfont \theabstract
\end{minipage}
}
}%
\vskip10pt%
\noindent
\@ifundefined{@abstractadd}{}{%
{%
\parbox{\linewidth}{%
\abstractaddfont \@abstractadd}%
}%
\vskip10pt%
}%
\noindent
\@ifundefined{@keywords}{}{%
{%
\parbox{\linewidth}{%
\keywordsfont %
\textbf{Keywords:} \@keywords}%
}%
\vskip10pt%
% \newline
}%
}
%% Manual adjustment of vertical distance, useful for overall formatting
\newlength\vert@adjust
\newcommand\verticaladjustment[1]{\setlength{\vert@adjust}{#1}}
%% Command to define an affiliation list in a footnote
\def\authaffil{%
\iftoggle{affiltop}{
\@author\par%
% \vskip2pt
}{
\AB@authlist\par
\protected@xdef\@thanks{\@thanks\protect\footnotetext[\the\c@footnote]{\AB@affillist\newline}}%
}
}
%% Command to define a contact email switch
\def\contactswitch{%
\contactfont\@ifundefined{@contact}{}{\textbf{\normalfont*}~E-Mail:~\@contact}\par%
%
\vskip3pt
}
%% Command to define an "equal contribution" switch
\def\equalcontribswitch{
\footerfont\@ifundefined{@equalcontrib}{}{\textsuperscript{\textbf{\dag}}~These authors contributed equally}\par%
%
\vskip3pt
}
\newcommand{\abstractBox}[2]{%
\noindent%
\begin{center}
\begin{tcolorbox}[
colback=absshadecolor,
left=0mm,
right=0mm,%
top=1mm,%
bottom=1mm,%
boxsep=2mm,%
toptitle=0.5mm,
bottomtitle=0.5mm,%
boxrule=0pt%
%
]
{\absfont\bfseries\large Abstract}\\%
#1
\end{tcolorbox}
\end{center}
}
%%%% Custom title page
\renewcommand{\@maketitle}{%
\iftoggle{anonymous}{%
\begin{center}
{\titlefont \@title\par}
\vskip10pt
\iftoggle{noauthors}{}{%
\textit{Anonymous Authors}\par
\vspace{10pt}
}
% the date
\iftoggle{nodate}{}{%
\@ifundefined{@pubdate}{\today}{\@pubdate}
\vskip13pt
}
{\textbf{Abstract}\par}
\vskip5pt
% \abstractBox{
\abscontent{}
% }{absshadecolor}
\end{center}
}{%
\iftoggle{shortintro}
{% if short intro i.e. SI
% patch author command to center section
\patchcmd{\@author}{\raggedright}{\centering}{}{}
%
\topskip0pt
\vspace*{\fill}%
%
{\centering\baselineskip=24pt\subtitlefont Supplementary Information for\par}%
{\centering\baselineskip=24pt\titlefont \@title\par}%
%
\vskip10pt
%
% author names / addresses
{\centering\authaffil{}}
%
\vskip8pt
%
% equal contribution
{\centering\equalcontribswitch{}}
% corresponding email
{\centering\contactswitch{}}
%
\vspace*{\fill}%
\iftoggle{toc}{%
\tableofcontents
}{}
}
{% else if complete paper
%
\vskip10pt%
%
{\raggedright\baselineskip=24pt\titlefont \@title\par}%
%
\vskip10pt
%
% author names / addresses
\iftoggle{noauthors}{%
}{
\raggedright\authaffil{}
%