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data_preparation.md

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Data preparation

All our data are preprocessed into 0.1Hz signals of length of 180 time steps.

The DANP model in src/model/DANP.py takes in three pytorch tensors as input: train_real.pt, test_real.pt, and sim_data.pt. Each of the three tensors should be of dimension [N, 180, 7], where N is the number of rows, depending on source data. The 7 columns are features in the following order:

[MAP, motor_speed, pump_flow, LVP, heart_rate, tau_lv, contractiity]

Please see the paper for more details on preprocessing.