Generating output (.mod files etc.) outside of source directory

[wvangeit]

Would it possible to add an option to the jnml script that allows one to put the generated model files (e.g. .mod files) in another directory.
As a temporary solution I created the following Python wrapper to the jnml command:
https://github.com/wvangeit/jNeuroML/blob/development/pyjnml
that more or less supports this feature.

[pgleeson]

Good idea. This would require updating all of the export classes to handle the new file location; the feature would be useful for other formats besides NEURON.

This will be straightforward, but would probbaly be best to do at the same time as giving command line argument handling an overhaul. I have created a new issue specifically for this: #12

[JustasB]

Yes, I would like this too

[pgleeson]

Added a quick & dirty implementation of this here in development: b388281

jnml LEMS_NML2_Ex0_IaF.xml -neuron -run -nogui -outputdir /tmp/nnnn/

will work, but

jnml LEMS_NML2_Ex0_IaF.xml -neuron -run -outputdir /tmp/nnnn/

still hangs