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I have followed the instructions to install for Windows, and it appears the installation goes fine, but when trying to open the GUI I get an error:
(base) PS C:\Users\Yu Lab> conda activate suite2p (suite2p) PS C:\Users\Yu Lab> python -m suite2p Traceback (most recent call last): File "C:\ProgramData\Anaconda3\envs\suite2p\lib\runpy.py", line 194, in _run_module_as_main return _run_code(code, main_globals, None, File "C:\ProgramData\Anaconda3\envs\suite2p\lib\runpy.py", line 87, in _run_code exec(code, run_globals) File "C:\ProgramData\Anaconda3\envs\suite2p\lib\site-packages\suite2p\__main__.py", line 84, in <module> main() File "C:\ProgramData\Anaconda3\envs\suite2p\lib\site-packages\suite2p\__main__.py", line 80, in main gui.run() File "C:\ProgramData\Anaconda3\envs\suite2p\lib\site-packages\suite2p\gui\gui2p.py", line 712, in run GUI = MainWindow(statfile=statfile) File "C:\ProgramData\Anaconda3\envs\suite2p\lib\site-packages\suite2p\gui\gui2p.py", line 96, in __init__ b0 = self.make_buttons() File "C:\ProgramData\Anaconda3\envs\suite2p\lib\site-packages\suite2p\gui\gui2p.py", line 155, in make_buttons masks.make_colorbar(self, b0) File "C:\ProgramData\Anaconda3\envs\suite2p\lib\site-packages\suite2p\gui\masks.py", line 192, in make_colorbar colorbarW = pg.GraphicsLayoutWidget(parent) File "C:\ProgramData\Anaconda3\envs\suite2p\lib\site-packages\pyqtgraph\widgets\GraphicsLayoutWidget.py", line 51, in __init__ GraphicsView.__init__(self, parent) File "C:\ProgramData\Anaconda3\envs\suite2p\lib\site-packages\pyqtgraph\widgets\GraphicsView.py", line 61, in __init__ QtWidgets.QGraphicsView.__init__(self, parent) TypeError: 'PySide6.QtWidgets.QGraphicsView.__init__' called with wrong argument types: PySide6.QtWidgets.QGraphicsView.__init__(MainWindow) Supported signatures: PySide6.QtWidgets.QGraphicsView.__init__(Union[PySide6.QtWidgets.QWidget, NoneType] = None) PySide6.QtWidgets.QGraphicsView.__init__(PySide6.QtWidgets.QGraphicsScene, Union[PySide6.QtWidgets.QWidget, NoneType] = None)
If I just open python and import suite2p I don't get any errors.
I see issue #942 appears to have the same error, but the advice from maintainers was "This is a pyqtgraph issue and an incompatibility with pyside6 6.5. We (pyqtgraph maintainers) are about to release PyQtGraph 0.13.3 which will address this issue." But my PyQtGraph version is 0.13.3 when I do pip show pyqtgraph.
Provide environment info:
active environment : base
active env location : C:\ProgramData\Anaconda3
shell level : 1
user config file : C:\Users\Yu Lab\.condarc
populated config files : C:\Users\Yu Lab\.condarc
conda version : 4.12.0
conda-build version : 3.21.6
python version : 3.9.7.final.0
virtual packages : __cuda=12.0=0
__win=0=0
__archspec=1=x86_64
base environment : C:\ProgramData\Anaconda3 (read only)
conda av data dir : C:\ProgramData\Anaconda3\etc\conda
conda av metadata url : None
channel URLs : https://repo.anaconda.com/pkgs/main/win-64
https://repo.anaconda.com/pkgs/main/noarch
https://repo.anaconda.com/pkgs/r/win-64
https://repo.anaconda.com/pkgs/r/noarch
https://repo.anaconda.com/pkgs/msys2/win-64
https://repo.anaconda.com/pkgs/msys2/noarch
package cache : C:\ProgramData\Anaconda3\pkgs
C:\Users\Yu Lab\.conda\pkgs
C:\Users\Yu Lab\AppData\Local\conda\conda\pkgs
envs directories : C:\Users\Yu Lab\.conda\envs
C:\ProgramData\Anaconda3\envs
C:\Users\Yu Lab\AppData\Local\conda\conda\envs
platform : win-64
user-agent : conda/4.12.0 requests/2.26.0 CPython/3.9.7 Windows/10 Windows/10.0.22000
administrator : False
netrc file : None
offline mode : False
The text was updated successfully, but these errors were encountered:
What worked for me was this specific order: conda create --name suite2p python=3.9 conda activate suite2p pip install PyQt-builder python -m pip install suite2p[gui] python -m pip install suite2p[io] python -m suite2p
Describe the issue:
I have followed the instructions to install for Windows, and it appears the installation goes fine, but when trying to open the GUI I get an error:
(base) PS C:\Users\Yu Lab> conda activate suite2p (suite2p) PS C:\Users\Yu Lab> python -m suite2p Traceback (most recent call last): File "C:\ProgramData\Anaconda3\envs\suite2p\lib\runpy.py", line 194, in _run_module_as_main return _run_code(code, main_globals, None, File "C:\ProgramData\Anaconda3\envs\suite2p\lib\runpy.py", line 87, in _run_code exec(code, run_globals) File "C:\ProgramData\Anaconda3\envs\suite2p\lib\site-packages\suite2p\__main__.py", line 84, in <module> main() File "C:\ProgramData\Anaconda3\envs\suite2p\lib\site-packages\suite2p\__main__.py", line 80, in main gui.run() File "C:\ProgramData\Anaconda3\envs\suite2p\lib\site-packages\suite2p\gui\gui2p.py", line 712, in run GUI = MainWindow(statfile=statfile) File "C:\ProgramData\Anaconda3\envs\suite2p\lib\site-packages\suite2p\gui\gui2p.py", line 96, in __init__ b0 = self.make_buttons() File "C:\ProgramData\Anaconda3\envs\suite2p\lib\site-packages\suite2p\gui\gui2p.py", line 155, in make_buttons masks.make_colorbar(self, b0) File "C:\ProgramData\Anaconda3\envs\suite2p\lib\site-packages\suite2p\gui\masks.py", line 192, in make_colorbar colorbarW = pg.GraphicsLayoutWidget(parent) File "C:\ProgramData\Anaconda3\envs\suite2p\lib\site-packages\pyqtgraph\widgets\GraphicsLayoutWidget.py", line 51, in __init__ GraphicsView.__init__(self, parent) File "C:\ProgramData\Anaconda3\envs\suite2p\lib\site-packages\pyqtgraph\widgets\GraphicsView.py", line 61, in __init__ QtWidgets.QGraphicsView.__init__(self, parent) TypeError: 'PySide6.QtWidgets.QGraphicsView.__init__' called with wrong argument types: PySide6.QtWidgets.QGraphicsView.__init__(MainWindow) Supported signatures: PySide6.QtWidgets.QGraphicsView.__init__(Union[PySide6.QtWidgets.QWidget, NoneType] = None) PySide6.QtWidgets.QGraphicsView.__init__(PySide6.QtWidgets.QGraphicsScene, Union[PySide6.QtWidgets.QWidget, NoneType] = None)
If I just open python and import suite2p I don't get any errors.
I see issue #942 appears to have the same error, but the advice from maintainers was "This is a pyqtgraph issue and an incompatibility with pyside6 6.5. We (pyqtgraph maintainers) are about to release PyQtGraph 0.13.3 which will address this issue." But my PyQtGraph version is 0.13.3 when I do
pip show pyqtgraph
.Provide environment info:
The text was updated successfully, but these errors were encountered: