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What R version does this require? #42

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esorlien opened this issue Sep 6, 2024 · 2 comments
Open

What R version does this require? #42

esorlien opened this issue Sep 6, 2024 · 2 comments

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@esorlien
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esorlien commented Sep 6, 2024

Hello, thank you for depositing this cool tool!

I have been using MiloR, installed with R version 4.4.1 but I was unable to add miloDE to my environment. Does this require 4.3? Due to a security vulnerability in R4.3 my University made this version unavailable, please let me know if it is possible to install in more recent version of R!

Thank you,
Erin (Postdoc, Univ. of Notre Dame)

@amissarova
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Hi @esorlien, apologies for the overdue response,

Can you please paste the error you get while trying to install miloDE?

@amissarova
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@esorlien, so I just managed to install miloDE in R 4.4.1, but you first have to ensure that you have installed scuttle (I also assume you have miloR installed already).
Can you run this first:
install.packages("BiocManager")
BiocManager::install("scuttle")

and then you can go ahead and install miloDE.
Please lmk if this sorted it for you? Thanks!

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