diff --git a/idc_index/index.py b/idc_index/index.py index 3b9d290..d9f6f01 100644 --- a/idc_index/index.py +++ b/idc_index/index.py @@ -100,7 +100,7 @@ def __init__(self): "clinical_index": { "description": "Index of clinical data accompanying the available images.", "installed": False, - "url": f"https://idc-open-metadata.s3.amazonaws.com/bigquery_export/idc_{idc_version}_clinical/column_metadata/000000000000.parquet", + "url": f"{asset_endpoint_url}/clinical_index.parquet", }, } @@ -1794,6 +1794,7 @@ def sql_query(self, sql_query): """ index = self.index + logger.debug("Executing SQL query: " + sql_query) # TODO: find a more elegant way to automate the following: https://www.perplexity.ai/search/write-python-code-that-iterate-XY9ppywbQFSRnOpgbwx_uQ if hasattr(self, "sm_index"): sm_index = self.sm_index diff --git a/pyproject.toml b/pyproject.toml index b02f033..2a20f85 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -33,8 +33,8 @@ classifiers = [ dynamic = ["version"] dependencies = [ "click", - 'duckdb>=0.10.0', - "idc-index-data==18.2.0", + 'duckdb>=0.10.0,<1.1.0', + "idc-index-data==19.0.1", "packaging", "pandas<2.2", "psutil",