diff --git a/idc_index/cli.py b/idc_index/cli.py index 7cd01ab..b8cc40f 100644 --- a/idc_index/cli.py +++ b/idc_index/cli.py @@ -167,11 +167,17 @@ def download_from_selection( if series_instance_uid else None ) + crdc_series_uuid = ( + [uid.strip() for uid in (",".join(crdc_series_uuid)).split(",")] + if crdc_series_uuid + else None + ) logger_cli.debug("Inputs received from cli download:") logger_cli.debug(f"collection_id: {collection_id}") logger_cli.debug(f"patient_id: {patient_id}") logger_cli.debug(f"study_instance_uid: {study_instance_uid}") logger_cli.debug(f"series_instance_uid: {series_instance_uid}") + logger_cli.debug(f"crdc_series_uuid: {crdc_series_uuid}") logger_cli.debug(f"dry_run: {dry_run}") logger_cli.debug(f"quiet: {quiet}") logger_cli.debug(f"show_progress_bar: {show_progress_bar}")