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Unable to edit Reported Trait name in depocuration #1422

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eks-ebi opened this issue Sep 4, 2024 · 4 comments
Open

Unable to edit Reported Trait name in depocuration #1422

eks-ebi opened this issue Sep 4, 2024 · 4 comments
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Type: Bug Reported problem to be fixed

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@eks-ebi
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eks-ebi commented Sep 4, 2024

I need to correct the name of this Reported Trait in depocuration (https://www.ebi.ac.uk/gwas/depo-curation/reported-traits). But when I tried to edit the name, I get the following message:
An unexpected error occurred.

The change I am trying to make is:
Alpha- levels --> Alpha-(1,6)-fucosyltransferase levels

@eks-ebi eks-ebi added the Type: Bug Reported problem to be fixed label Sep 4, 2024
@sajo-ebi sajo-ebi self-assigned this Sep 4, 2024
@eks-ebi
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eks-ebi commented Sep 4, 2024

Discovered that trait name can't be changed because it already exists. So need to delete "Alpha- levels" and reannotate study.

@sajo-ebi can you check in database to see if any other studies are annotated with "Alpha- levels" as Reported trait?

@ljwh2
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ljwh2 commented Sep 18, 2024

@eks-ebi check if any published studies are annotated with Alpha- levels, if so, reannotate these studies in Depo-Curation

@ljwh2 ljwh2 assigned eks-ebi and unassigned sajo-ebi Sep 18, 2024
@eks-ebi
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eks-ebi commented Sep 19, 2024

@ljwh2 Lizzy has reannotated the study with the correct Reported trait as part of a larger update to the submission, and it will be re-published today. I have also now deleted the incorrect Alpha- levels reported trait from the traits list in depo-curation.

So this ticket can be closed.

@eks-ebi
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eks-ebi commented Sep 23, 2024

confirmed in staging

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