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rna_seq_sample_excluded.txt
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rna_seq_sample_excluded.txt
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#libraryId excluded comment annotatorId lastModificationDate
SRX618126 FALSE Streaming failure during Kallisto step. 10M reads used instead of 51M. Rerun once with same result. Redownlaod not possible because problems with GTEx. This library can still be used because enough reads were mapped. JR 2016-04-22
SRX616976 FALSE Streaming failure during Kallisto step. 33M reads used instead of 43M. Rerun once with same result. Redownlaod not possible because problems with GTEx. This library can still be used because enough reads were mapped. JR 2016-04-22
SRX099901 FALSE Nematode sample with very few reads sequenced, and < 300,000 mapped. This is not enough to get good estimation of expression levels. JR 2016-04-22
SRX589537 TRUE Library with very low complexity, and a lot of duplicated reads from adapters. Excluded because very few reads mapped, not enough to get good estimation of expression levels. JR 2016-04-22
SRX589538 FALSE Library with only 132,987 reads sequenced. This is not enough to get good estimation of expression levels. JR 2016-05-20
SRX1629206 TRUE Mediocre quality! SM 2018-12-10
ERX016344 TRUE Mediocre quality! SM 2018-12-18
SRX028836 TRUE Weak quality and contaminante SM 2018-12-18
SRX2532335 TRUE Bad quality SM 2018-12-18
SRX502869 TRUE Bad mapping because of contaminantes? SM 2018-12-18
SRX502871 TRUE Bad mapping because of contaminantes? SM 2018-12-18
SRX589537 TRUE Bad mapping because of contaminantes SM 2018-12-18
SRR1509499 TRUE Bad quality single-end run mixed with paired-end runs SM 2018-11-06
SRR1509502 TRUE Bad quality single-end run mixed with paired-end runs SM 2018-11-06
SRR1509500 TRUE Bad quality single-end run mixed with paired-end runs SM 2018-11-06
SRR1509505 TRUE Bad quality single-end run mixed with paired-end runs SM 2018-11-06
SRR1509504 TRUE Bad quality single-end run mixed with paired-end runs SM 2018-11-06
SRR1509503 TRUE Bad quality single-end run mixed with paired-end runs SM 2018-11-06
SRR1509501 TRUE Bad quality single-end run mixed with paired-end runs SM 2018-11-06
SRR125338 TRUE Bad quality and very low number of total sequences SM 2019-01-07
SRR125339 TRUE Bad quality and very low number of total sequences SM 2019-01-07